foldtree

Contents:

  • Tree inspector
  • foldseek2tree
    • consensustree()
    • MDS_smooth()
    • Tajima_dist()
    • simple_logdist()
    • runargs()
    • runFoldseekdb()
    • runFoldseek_allvall()
    • runFoldseek_allvall_EZsearch()
    • kernelfun()
    • runFastme()
    • runQuicktree()
    • distmat_to_txt()
    • postprocess()
    • read_dbfiles3di()
    • structblob2tree()
  • AFDB tools
    • get_amino_acid_sequence()
    • descr()
    • filter_plddt()
    • grab_struct()
    • chunk()
    • unirequest_tab()
    • grab_entries()
    • res2fasta()
  • Treescore
foldtree
  • Search

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