Index

C

chunk() (in module src.AFDB_tools)

consensustree() (in module src.foldseek2tree)

D

descr() (in module src.AFDB_tools)

distmat_to_txt() (in module src.foldseek2tree)

F

filter_plddt() (in module src.AFDB_tools)

G

get_amino_acid_sequence() (in module src.AFDB_tools)

grab_entries() (in module src.AFDB_tools) grab_struct() (in module src.AFDB_tools)

K

kernelfun() (in module src.foldseek2tree)

M

MDS_smooth() (in module src.foldseek2tree) module src.AFDB_tools src.foldseek2tree

P

postprocess() (in module src.foldseek2tree)

R

read_dbfiles3di() (in module src.foldseek2tree) res2fasta() (in module src.AFDB_tools) runargs() (in module src.foldseek2tree) runFastme() (in module src.foldseek2tree)

runFoldseek_allvall() (in module src.foldseek2tree) runFoldseek_allvall_EZsearch() (in module src.foldseek2tree) runFoldseekdb() (in module src.foldseek2tree) runQuicktree() (in module src.foldseek2tree)

S

simple_logdist() (in module src.foldseek2tree) src.AFDB_tools module

src.foldseek2tree module structblob2tree() (in module src.foldseek2tree)

T

Tajima_dist() (in module src.foldseek2tree)

U

unirequest_tab() (in module src.AFDB_tools)